Saturday, April 13, 2013

Scientists find interferon, one of the body's own proteins, induces persistent viral infection

Apr. 9, 2013 ? Scientists at The Scripps Research Institute (TSRI) have made a counterintuitive finding that may lead to new ways to clear persistent infection that is the hallmark of such diseases as AIDS, hepatitis B and hepatitis C.

The study, reported in the April 12, 2013 issue of the journal Science, focused on the activity of the body's type 1 interferon (IFN-I) proteins. Since its discovery over 50 years ago, IFN-I has been believed to be an especially powerful antiviral agent that marshals the immune system's response against the body's foreign invaders. But in the new study, the TSRI scientists document in mice that IFN-I initiates persistent infection and limits the generation of an effective antiviral immune response.

"Our findings illuminate an unexpected role for IFN-I protein(s) in persistent infections, which has major implications for how we treat these infections," said Michael B. A. Oldstone, a professor in the Department of Immunology and Microbial Science at TSRI and senior investigator for the study.

Mystery of Immune Suppression

For decades, Oldstone and other virologists around the world have been trying to understand how some viruses manage to persist in their hosts.

One big clue, discovered only in recent years, is that some of these viruses are especially effective at getting into cells of the immune system known as dendritic cells. These cells serve as key detectors of infection and normally respond to viral infection by producing IFN-I proteins. They also produce both immune-enhancing proteins (cytokines/chemokines) to drive forward a vigorous immune response, as well as immune-suppressing proteins including interleukin-10 (IL-10) and PD-1, which act as a braking system that balances the immune response to keep within healthy (non-autoimmune) limits.

Persistent viruses can use this immune-suppressing effect for their own purposes. In several experimental models of persistent infections and in humans with persistent infections, a rise in IL-10 and PD-L1 is followed by declines in the function and numbers of antiviral T-cells. Many of the surviving T cells are rendered ineffectual -- a phenomenon called "T-cell exhaustion" or "hyporesponsiveness."

A Surprising Observation

To better understand how this immune-suppressing response develops, Oldstone and his team, including first authors John R. Teijaro and Cherie Ng, along with Brian Sullivan, looked in detail at the early events in a persistent viral infection. The team used a now-standard animal model that Oldstone developed almost 30 years ago: laboratory mice infected with lymphocytic choriomeningitis virus (LCMV) Clone (Cl) 13 strain.

One initial observation surprised them. "A day after infection, bloodstream levels of IFN-I were at least several times higher in the persistent infection, compared to a non-persistent LCMV infection," said Teijaro.

The persistent LCMV Cl 13 strain also turned out to be much better at infecting plasmacytoid dendritic cells -- which are considered the principal source of IFN-I proteins during viral infections. By contrast, the LCMV Armstrong (ARM) 53b strain, from which Cl 13 was derived, generated significantly less IFN-I and did not induce a persistent infection but rather generated antiviral effector CD8 T cells; this infection was terminated within 7 to 10 days. Cl 13 differs from ARM by only three amino acids (protein building blocks) of which just two are important; one in the glycoprotein for binding and entry into dendritic cells and the other in the viral polymerase that enhances viral replication.

Earlier Clearance and Fewer Malfunctions

The production of IFN-Is by plasmacytoid dendritic cells has been considered a normal and beneficial part of the immune reaction to a viral infection. "We usually think of IFN-I proteins as antiviral proteins, so that more IFN is better," said Ng. Indeed, when she and Teijaro used a monoclonal antibody to block IFN-I-alpha-beta (-a-b) receptor, activity just prior to or after infection with Cl 13, they observed a sharp drop in the production of IL-10 and PD-L1, loss of excessive cytokine/chemokine expression (cytokine storm) and maintenance of normal secondary lymphoid tissue architecture.

But the scientists found over the longer term a sharp drop in levels of immune-suppressing IL-10, as well as PD-L1, both inducers of T-cell exhaustion, was associated with restoration of antiviral immune response and virus clearance. And although blocking the IFN-I-a-b receptor led to higher bloodstream levels of virus in the first days after infection, it soon brought about a stronger, infection-clearing response.

"Even when we blocked IFN-I-a-b receptor after a persistent infection had been established and T-cell exhaustion had set in, we still saw a significantly earlier clearance of the virus," Ng said.

Blocking IFN-I-a-b receptor also prevented or reversed other immune malfunctions caused by the persistent LCMV strain, including a disruption of the structure of the spleen tissue and diminished T cell entry and maintenance within lymphoid structures in the spleen that contain dendritic cells. The interaction of dendritic cells with T cells is necessary to generate antiviral effector CD8 and CD4 T cells. "We saw a restoration of this lymphoid architecture, as well as an increase in a subset of antiviral T cells, natural killer cells and dendritic cells, and restoration of antiviral CD4 T cell function," said Teijaro.

Potentially Broad Applications

Oldstone and his team now plan to study IFN-I signaling pathways in further detail. In particular, they hope to determine whether the IFN-I-a-b receptor blocking strategy can work against chronic viral infections in humans. The scientists will also seek small pharmacologic molecules with the same function.

"Most of our findings in the LCMV model mirror what has been observed in human persistent infections, namely the upregulation of IL-10 and PD-L1, and the disruption of lymphoid architecture," said Oldstone.

Conceivably, the IFN-I-a-b receptor-blocking strategy could have broad clinical applications. In terms of viruses alone, chronic HIV, hepatitis B and hepatitis C infections collectively are found in hundreds of millions of people worldwide. Other common persistent viruses include Epstein-Barr virus, cytomegalovirus and cancer-causing human papilloma virus. Researchers have estimated that the average person at any one time carries at least several persistent, often silent viral infections.

Other contributors to the study, "Persistent LCMV infection is controlled by blockade of type 1 interferon signaling," were Kathleen C. F. Sheehan and Robert D. Schreiber of Washington School of Medicine at St. Louis; and Megan J. Welch, Andrew M. Lee, and Juan Carlos de la Torre of TSRI.

The study was supported by the National Institutes of Health grants AI009484, AI057160 and AI077719, as well as an American Heart Association Fellowship (11POST7430106).

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Story Source:

The above story is reprinted from materials provided by The Scripps Research Institute.

Note: Materials may be edited for content and length. For further information, please contact the source cited above.


Journal Reference:

  1. J. R. Teijaro, C. Ng, A. M. Lee, B. M. Sullivan, K. C. F. Sheehan, M. Welch, R. D. Schreiber, J. Carlos de la Torre, M. B. A. Oldstone. Persistent LCMV Infection Is Controlled by Blockade of Type I Interferon Signaling. Science, 2013; 340 (6129): 207 DOI: 10.1126/science.1235214

Note: If no author is given, the source is cited instead.

Disclaimer: This article is not intended to provide medical advice, diagnosis or treatment. Views expressed here do not necessarily reflect those of ScienceDaily or its staff.

Source: http://feeds.sciencedaily.com/~r/sciencedaily/top_news/top_health/~3/jq2JIzicfHA/130411142815.htm

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Thursday, April 11, 2013

Joss Whedon's Advice To Aspiring Filmmakers: 'Just Do It'

Don't think you can do what Joss Whedon does? The filmmaker disagrees. According to Whedon, making a movie isn't so hard. Just follow what he did with his latest effort, an adaptation of Shakespeare's "Much Ado About Nothing." "Get a home that's big enough to fit your camera in, and be best friends with Nathan [...]

Source: http://moviesblog.mtv.com/2013/04/10/joss-whedon-much-ado-movie-advice/

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Wednesday, April 10, 2013

Gene variations predict chemotherapy side effects

Apr. 9, 2013 ? Seemingly benign differences in genetic code from one person to the next could influence who develops side effects to chemotherapy, a Mayo Clinic study has found. The study identified gene variations that can predispose people to chemotherapy-induced peripheral neuropathy, a condition that is hard to predict and often debilitating enough to cause cancer patients to stop their treatment early.

Results of the research were presented today at the American Association for Cancer Research Annual Meeting 2013 in Washington, D.C.

The study, which implicates the genes EPHA5, ARHGEF10, and PRX, is the first to mine large swaths of the human genome for predictors of chemotherapy side effects. Further research into these genes and others may enable clinicians to use genomic information to more safely deliver these potentially toxic treatments.

"Our study creates a path for how to approach the whole genome in order to tailor cancer treatments," says Andreas Beutler, M.D., an oncologist at Mayo Clinic Cancer Center and senior author of the study. "That is important because we would not only like to cure people's cancer or help them live longer, but we also wish to provide them with the best quality of life."

Chemotherapy-induced peripheral neuropathy affects an estimated 20 to 30 percent of cancer patients treated with chemotherapy agents. The symptoms can be as mild as a light tingling or numbness, but can progress to a loss of feeling in the hands and feet, or to the point where patients can no longer walk normally and are left with a permanent feeling of numbness or pain. Currently, there is no way to predict which patients undergoing chemotherapy will develop this side effect or to what degree.

There are approximately 50 genes linked to a hereditary form of peripheral neuropathy. However, many of the people who have a mutation in one of these genes experience no symptoms until they are exposed to chemotherapy. Dr. Beutler decided to first consider those 50 genes as the most likely suspects, and then expand his search to the wider human genome for other predictors of chemotherapy-induced peripheral neuropathy.

Dr. Beutler's approach relied on exome sequencing, a type of DNA sequencing that focuses on the exonic regions of the genome that code for functional proteins. These protein-coding regions are believed to harbor about 85 percent of all disease-causing mutations.

Dr. Beutler and his colleagues performed exome sequencing on 20,794 genes from 119 cancer patients, over half of whom had developed chemotherapy-induced peripheral neuropathy during the course of a chemotherapy clinical trial.

First, they looked at the 50 hereditary neuropathy genes and found one -- EPHA5 -- that appeared to predispose the patients to chemotherapy-induced peripheral neuropathy. Next, researchers analyzed the remaining 20,000 genes and discovered two new genes -- ARHGEF10 and PRX -- that are also associated with chemotherapy-induced peripheral neuropathy. They validated those findings in another group of 75 cancer patients.

The results suggest that the two conditions, hereditary neuropathy and chemotherapy-induced peripheral neuropathy, may share genetic roots in some patients. They also point to ways that clinicians can improve cancer treatment. For instance, if clinicians know which patients are at risk for a particular chemotherapy side effect, they can use the information to individualize treatment.

Dr. Beutler and his team plan to expand their study to look at the entire genome, not just the protein-coding regions, in as many as 1,000 cancer patients. Dr. Beutler says any additional genes they find will add to the larger picture of symptom control in cancer treatment.

"What we are doing at Mayo is much larger than just uncovering a handful of genes," says Dr. Beutler. "We are using cutting-edge genomics research to enhance our strengths in clinical trials and develop new methods to individualize medicine."

Co-authors include, Amit Kulkarni, M.B.B.S.; Rahul Kanwar; Rui Qin, Ph.D.; Zhifu Sun, M.D.; Anh Le-Lindqwister, Terry Therneau, Ph.D.; and Charles Loprinzi, M.D., all of Mayo Clinic.

Funding for the study was provided by the American Cancer Society, the National Institutes of Health grants CA124477 and CA37404, the Mayo Clinic Center for Individualized Medicine and the Richard M. Schulze Family Foundation.

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Story Source:

The above story is reprinted from materials provided by Mayo Clinic.

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Note: If no author is given, the source is cited instead.

Disclaimer: This article is not intended to provide medical advice, diagnosis or treatment. Views expressed here do not necessarily reflect those of ScienceDaily or its staff.

Source: http://feeds.sciencedaily.com/~r/sciencedaily/health_medicine/genes/~3/2fR2tyYtLVU/130409110001.htm

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Kindergarten Student Suspended for Distracting, Distruptive Haircut

Source: http://www.thehollywoodgossip.com/2013/04/kindergarten-student-suspended-for-distracting-distruptive-hairc/

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Tuesday, April 9, 2013

New Era for Energy Department Expected Under a Secretary Moniz

With stimulus funding for clean energy at an end, climate-change policy dead in Congress, and harsh budget cuts looming over all agencies thanks to the sequestration, the days of President Obama?s vision of the Energy Department as a green juggernaut have probably come to an end.

But Ernest Moniz, who faces a Senate confirmation hearing Tuesday morning as Obama?s choice to become the next Energy secretary, would be likely to steer the department into a new era, one in which climate change still plays a key role in guiding its mission but so, too, do policies connected to the nation?s recent boom in oil and natural-gas development.

The MIT professor and former Energy undersecretary in the Clinton administration is also likely to renew the agency?s traditional focus on nuclear energy, nuclear waste, and nonproliferation of nuclear weapons.

Before Obama took office, the Energy Department had been widely viewed as a backwater agency. But people close to Moniz say they expect him to revitalize the department?s original mission while also taking on new issues involving global trade and commerce.

Like the man he would succeed, Nobel laureate Steven Chu, Moniz is a renowned physicist with serious research chops: He is director of the Energy Initiative at MIT, where he has been on the faculty since 1973. Unlike Chu, however, Moniz has a long record of supporting a broad portfolio of energy sources, including natural gas. He also has a strong background in nuclear issues, making him a better fit considering the agency?s historic nuclear portfolio.

Also unlike Chu, Moniz is viewed as a pragmatic and politically savvy operator who knows his way around Washington.

?I think it will be a very different agency than it was in the first term,? said Charles Ebinger, director of the Energy Security Initiative at the Brookings Institution, who has worked with Moniz on energy policy for many years.

?Ernie knows climate change, but also unconventional oil and gas and coal and nuclear. He will push the president towards a more balanced policy. I think you?ll see a focus on unconventional oil and gas and not as much on renewables.?

Frank Verrastro, director of the energy program at the Center for Strategic and International Studies, said, ?He?ll be a more complete secretary of Energy. He brings different skills. He?s focused on climate and clean energy, but he?s aware of what?s going on in the oil and gas space. It?s an opportunity for the administration to gain back some energy-policy stake.?

The nation?s energy picture has changed profoundly since 2008, when Obama appointed Chu to lead the DOE. Since then, a boom in unconventional oil and gas development, thanks to breakthroughs in hydraulic fracturing, or ?fracking,? technology has led to a dramatic increase in domestic oil and gas supply. Obama has been particularly bullish on natural gas as a one-two punch for his climate-change and economic goals: The fuel has half the carbon emissions of coal, and the new glut of it has lowered U.S. manufacturing costs.

The fossil-fuel industry, which regularly railed against Chu, has already indicated its openness to Moniz.

?Moniz seems to be a pragmatist on the important energy issues facing our nation including natural-gas development,? said John Krohn, a spokesman for Energy In Depth, which represents the gas-fracking industry in Washington. ?When he arrives at DOE, he will join many senior-level Obama officials who have publicly stated that natural gas is an important fuel for our nation?s environment and economic future.?

Among the biggest policy decisions facing the Energy Department in the coming years will be the question of whether or not to grant permits for U.S. companies to begin exporting natural gas. Manufacturers fear that exporting the fuel will increase their prices, but foreign policy thinkers believe it could help increase U.S. muscle in Asia. Moniz is expected to be a key player in these decisions.

Nuclear-energy issues are also likely to get more attention under Moniz. While some environmentalists remain wary of nuclear energy, Moniz is among a group of thinkers who see nuclear power?which produces no carbon emissions?as a key piece of a future climate policy. While nuclear-waste issues were not a forte of Chu?s, Moniz was part of the blue-ribbon commission on nuclear waste that last year recommended building medium-term nuclear-waste storage facilities that could hold waste for up to a century.

?There will be more attention paid to nuclear waste and the nuclear stockpile,? said John Deutch, a professor at MIT and former head of the CIA who held senior positions in the Energy and Defense departments during the Carter and Clinton administrations, and who has worked with Moniz on energy issues for more than 30 years.

?He will have a much broader agenda, and he will be asked to have a broader agenda by President Obama,? Deutch said.

Source: http://news.yahoo.com/era-energy-department-expected-under-secretary-moniz-223657993--politics.html

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Economist's View: Paul Krugman: Insurance and Freedom

Social insurance does not undermine free societies:

Insurance and Freedom, by Paul Krugman, Commentary, NY Times: ...How many Americans will be denied essential health care in the name of freedom?
I?m referring, of course, to the question of how many Republican governors will reject the Medicaid expansion that is a key part of Obamacare. What does that have to do with freedom? In reality, nothing. But when it comes to politics, it?s a different story. ... From the enthusiastic reception American conservatives gave Friedrich Hayek?s ?Road to Serfdom,? to Reagan, to the governors now standing in the way of Medicaid expansion, the U.S. right has sought to portray its position not as a matter of comforting the comfortable while afflicting the afflicted, but as a courageous defense of freedom. ...
These days, conservatives make very similar arguments against Obamacare. For example,?Senator Ron Johnson?of Wisconsin has called it the ?greatest assault on freedom in our lifetime.? And this kind of rhetoric matters, because when it comes to the main obstacle now remaining to more or less universal health coverage ? the reluctance of Republican governors to allow the Medicaid expansion that is a key part of reform ? it?s pretty much all the right has. ...
[However], Medicaid enjoys?remarkably strong public support. And now that health reform is the law of the land, the economic and fiscal case for individual states to accept Medicaid expansion is overwhelming. ... But such practical concerns can be set aside if you can successfully argue that insurance is slavery.
Of course, it isn?t. In fact, it?s hard to think of a proposition that has been more thoroughly refuted by history than the notion that social insurance undermines a free society. ...
In fact, the real, lived experience of Obamacare is likely to be one of significantly increased individual freedom. For all our talk of being the land of liberty, those holding one of the dwindling number of jobs that carry decent health benefits often feel anything but free, knowing that if they leave or lose their job, for whatever reason, they may not be able to regain the coverage they need. Over time, as people come to realize that affordable coverage is now guaranteed, it will have a powerful liberating effect.
But what we still don?t know is how many Americans will be denied that kind of liberation ? a denial all the crueler because it will be imposed in the name of freedom.

Posted by Mark Thoma on Monday, April 8, 2013 at 12:33 AM in Economics, Politics, Social Insurance?| Permalink? Comments?(44)

Source: http://economistsview.typepad.com/economistsview/2013/04/paul-krugman-insurance-and-freedom.html

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Blackmagic's Production Camera 4K gets full size cinema sensor, $3,995 pricetag

Image

No matter how hard companies try and keep secrets, when it comes to trade show floors there's always the risk that someone will snap a picture and steal their thunder. The latest casualty is Blackmagic, which will be announcing both a Pocket Cinema Camera and this, its Production Camera 4K. We're fairly sure that this will sit above its Cinema Camera, offering a bigger Super 35 sensor, global shutter and Thunderbolt connector alongside the SSD recorder, touchscreen LCD and EF lens mount we found on last year's model. When the company gets around to announcing the hardware properly, it'll be available for $3,995 -- low enough to make even the most ardent of DSLR fans think twice.

[Image Credit: Danielo Garcia]

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Via: 43 Rumors, Mu-43

Source: Danielo Garcia (Twitter)

Source: http://www.engadget.com/2013/04/08/blackmagic-production-camera-4k/

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